## Warning in dir.create(path = output_dir, showWarnings = TRUE): './
## outfiles_final' already exists
## Loading required package: knitr
knitr::include_graphics("Duhaime_Fig1.png")knitr::include_graphics("Duhaime_Fig2_sample_images.png")knitr::include_graphics("Duhaime_Fig3_count_maps_total.png")knitr::include_graphics("Duhaime_Fig7_EDS_spectra.png")